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Quick start

A flexible and scalable data analysis environment for reproducible neuroimaging with Neurodesk.

What is Neurodesk ? Local Hosted

Get started with Neurodesk

Select your setups and follow further instructions in the provided link.

Compute Platform
Your OS
Interface
Processor
Instructions:
Compute Platform
Local PC
HPC
Cloud
Google Colab
Operating System
Linux
Mac
Windows
Interface
Desktop
Command Line
Container
VSCode
Processor
x86
ARM
GPU
Instructions:

Community

Neurodesk is a community project.

Our active community provides transparency and inclusion. We encourage you to engage and contribute.

FAQ

Frequently Asked Questions

Discussions

Ask questions, suggest new features or raise any issues you have (Github account required)

Contributors

Contributors

Contribution Guide

Learn how you can contribute to Neurodesk code and documentation

Neurodesk Components

Details of each component within the Neurodesk project.
Neurodesk makes it easy for beginners and experts to use neuroimaging tools for desktop, hpc, web, and cloud.

Neurocontainers

Software container library

neurocontainer

Neurocommand

Core installer

Neurocommand
$ pip3 install -r neurodesk/requirements.txt --user
$ bash build.sh --cli
$ bash containers.sh
$ module use $PWD/local/containers/modules

Neurodesktop

Fully featured desktop in a container

Neurodesktop