BIDS conversion

Author: Thuy Dao

Date: 23 Nov 2024

License:

MIT License

Note: If this notebook uses neuroimaging tools from Neurocontainers, those tools retain their original licenses. Please see Neurodesk citation guidelines for details.

Citation and Resources:

Tools included in this notebook

dcm2niix:

• Li, X., Morgan, P. S., Ashburner, J., Smith, J., & Rorden, C. (2016). The first step for neuroimaging data analysis: DICOM to NIfTI conversion. Journal of Neuroscience Methods, 264, 47–56. https://doi.org/10.1016/j.jneumeth.2016.03.001

BIDScoin:

• Zwiers MP, Moia S and Oostenveld R (2022) BIDScoin: A User-Friendly Application to Convert Source Data to Brain Imaging Data Structure. Front. Neuroinform. 15:770608. doi: 10.3389/fninf.2021.770608

HeuDiConv:

• Yaroslav O. Halchenko, Mathias Goncalves, Satrajit Ghosh, Pablo Velasco, Matteo Visconti di Oleggio Castello, Taylor Salo, John T. Wodder II, Michael Hanke, Patrick Sadil, Krzysztof Jacek Gorgolewski, Horea-Ioan Ioanas, Chris Rorden, Timothy J. Hendrickson, Michael Dayan, Sean Dae Houlihan, James Kent, Ted Strauss, John Lee, Isaac To, … David N. Kennedy. (2024). HeuDiConv — flexible DICOM conversion into structured directory layouts (v1.3.1). Zenodo. https://doi.org/10.5281/zenodo.13994097

Dataset

This example uses a phantom dataset generated by the University of Arizona on their Siemens Skyra 3T with Syngo MR VE11c software on 2018_02_08.

BIDS conversion

1. In this interactive example notebook, we first download DICOM data using datalad.

2. Next we will convert DICOMS into the BIDS data structure using:

   • 2.1. dcm2niix which converts data to NIfTi and then manually organizes the folder.

   • 2.2. heudiconv to automate the conversion and organization with a provided heuristic file.

   • 2.3. bidscoin to automate the conversion and organization with the bidseditor interface (optionally using --automated to disable user interaction).

1. Data preparation

Download DICOM data from Datalad.

%%bash
datalad install https://datasets.datalad.org/repronim/heudiconv-reproin-example
cd heudiconv-reproin-example/REPROIN/dicom && datalad get 001

install(ok): /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example (dataset)
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0001-0001.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0001-0002.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0001-0003.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0001-0004.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0001-0005.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0002-0001.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0002-0002.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0002-0003.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0002-000
4.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-00
02-0005.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0
012-0003-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_
4/IM-0012-0003-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Local
izers_4/IM-0012-0003-0003.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/Localizers_4/IM-0012-0003-0004.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/Localizers_4/IM-0012-0003-0005.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/Localizers_4/IM-0012-0004-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/Localizers_4/IM-0012-0004-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/Localizers_4/IM-0012-0004-0003.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0005-0001.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0005-0002.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0005-0003.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0006-0001.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0006-0002.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0007-0001.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0007-0002.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0008-0
001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-
0008-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM
-0012-0009-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizer
s_4/IM-0012-0009-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Loc
alizers_4/IM-0012-0010-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/Localizers_4/IM-0012-0010-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/Localizers_4/IM-0012-0011-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/Localizers_4/IM-0012-0011-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/Localizers_4/IM-0012-0012-0001.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/Localizers_4/IM-0012-0012-0002.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0013-0001.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0013-0002.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0014-0001.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0014-0002.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0015-0001.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0015-0002.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0016-0001.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0016
-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-001
2-0017-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/
IM-0012-0017-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localiz
ers_4/IM-0012-0018-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/L
ocalizers_4/IM-0012-0018-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/Localizers_4/IM-0012-0019-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/Localizers_4/IM-0012-0019-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/Localizers_4/IM-0012-0020-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/Localizers_4/IM-0012-0020-0002.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0021-0001.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0021-0002.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0022-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0022-0002.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0023-0001.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0023-0002.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0024-0001.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0024-000
2.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-00
25-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0
012-0025-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_
4/IM-0012-0026-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Local
izers_4/IM-0012-0026-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/Localizers_4/IM-0012-0027-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/Localizers_4/IM-0012-0027-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/Localizers_4/IM-0012-0028-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/Localizers_4/IM-0012-0028-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/Localizers_4/IM-0012-0029-0001.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0029-0002.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0030-0001.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0030-0002.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0031-0001.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0031-0002.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0032-0001.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0032-0002.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0033-0
001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-
0033-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM
-0012-0034-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizer
s_4/IM-0012-0034-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Loc
alizers_4/IM-0012-0035-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/Localizers_4/IM-0012-0035-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/Localizers_4/IM-0012-0036-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/Localizers_4/IM-0012-0036-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/Localizers_4/IM-0012-0037-0001.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/Localizers_4/IM-0012-0037-0002.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0038-0001.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0038-0002.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0039-0001.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0039-0002.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0040-0001.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0040-0002.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0041-0001.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0041
-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-001
2-0042-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/
IM-0012-0042-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localiz
ers_4/IM-0012-0043-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/L
ocalizers_4/IM-0012-0043-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/Localizers_4/IM-0012-0044-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/Localizers_4/IM-0012-0044-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/Localizers_4/IM-0012-0045-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/Localizers_4/IM-0012-0045-0002.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0046-0001.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0046-0002.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0047-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0047-0002.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0048-0001.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0048-0002.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0049-0001.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0049-000
2.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-00
50-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0
012-0050-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_
4/IM-0012-0051-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Local
izers_4/IM-0012-0051-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/Localizers_4/IM-0012-0052-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/Localizers_4/IM-0012-0052-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/Localizers_4/IM-0012-0053-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/Localizers_4/IM-0012-0053-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/Localizers_4/IM-0012-0054-0001.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0054-0002.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0055-0001.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0055-0002.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0056-0001.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0056-0002.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0057-0001.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0057-0002.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0058-0
001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-
0058-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM
-0012-0059-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizer
s_4/IM-0012-0059-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Loc
alizers_4/IM-0012-0060-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/Localizers_4/IM-0012-0060-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/Localizers_4/IM-0012-0061-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/Localizers_4/IM-0012-0061-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/Localizers_4/IM-0012-0062-0001.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/Localizers_4/IM-0012-0062-0002.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0063-0001.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0063-0002.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0064-0001.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0064-0002.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0065-0001.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0065-0002.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0066-0001.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0066
-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-001
2-0067-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/
IM-0012-0067-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localiz
ers_4/IM-0012-0068-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/L
ocalizers_4/IM-0012-0068-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/Localizers_4/IM-0012-0069-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/Localizers_4/IM-0012-0069-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/Localizers_4/IM-0012-0070-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/Localizers_4/IM-0012-0070-0002.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0071-0001.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0071-0002.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0072-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0072-0002.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0073-0001.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0073-0002.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0074-0001.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0074-000
2.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-00
75-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0
012-0075-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_
4/IM-0012-0076-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Local
izers_4/IM-0012-0076-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/Localizers_4/IM-0012-0077-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/Localizers_4/IM-0012-0077-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/Localizers_4/IM-0012-0078-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/Localizers_4/IM-0012-0078-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/Localizers_4/IM-0012-0079-0001.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0079-0002.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0080-0001.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0080-0002.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0081-0001.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0081-0002.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0082-0001.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0082-0002.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0083-0
001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-
0083-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM
-0012-0084-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizer
s_4/IM-0012-0084-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Loc
alizers_4/IM-0012-0085-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/Localizers_4/IM-0012-0085-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/Localizers_4/IM-0012-0086-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/Localizers_4/IM-0012-0086-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/Localizers_4/IM-0012-0087-0001.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/Localizers_4/IM-0012-0087-0002.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0088-0001.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0088-0002.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0089-0001.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0089-0002.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0090-0001.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0090-0002.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0091-0001.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0091
-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-001
2-0092-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/
IM-0012-0092-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localiz
ers_4/IM-0012-0093-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/L
ocalizers_4/IM-0012-0093-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/Localizers_4/IM-0012-0094-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/Localizers_4/IM-0012-0094-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/Localizers_4/IM-0012-0095-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/Localizers_4/IM-0012-0095-0002.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0096-0001.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0096-0002.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0097-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0097-0002.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0098-0001.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0098-0002.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0099-0001.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0099-000
2.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-01
00-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0
012-0100-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_
4/IM-0012-0101-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Local
izers_4/IM-0012-0101-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/Localizers_4/IM-0012-0102-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/Localizers_4/IM-0012-0102-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/Localizers_4/IM-0012-0103-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/Localizers_4/IM-0012-0103-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/Localizers_4/IM-0012-0104-0001.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0104-0002.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0105-0001.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0105-0002.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0106-0001.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0106-0002.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0107-0001.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0107-0002.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0108-0
001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-
0108-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM
-0012-0109-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizer
s_4/IM-0012-0109-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Loc
alizers_4/IM-0012-0110-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/Localizers_4/IM-0012-0110-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/Localizers_4/IM-0012-0111-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/Localizers_4/IM-0012-0111-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/Localizers_4/IM-0012-0112-0001.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/Localizers_4/IM-0012-0112-0002.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0113-0001.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0113-0002.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0114-0001.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0114-0002.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0115-0001.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0115-0002.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0116-0001.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0116
-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-001
2-0117-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/
IM-0012-0117-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localiz
ers_4/IM-0012-0118-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/L
ocalizers_4/IM-0012-0118-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/Localizers_4/IM-0012-0119-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/Localizers_4/IM-0012-0119-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/Localizers_4/IM-0012-0120-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/Localizers_4/IM-0012-0120-0002.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0121-0001.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0121-0002.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0122-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0122-0002.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0123-0001.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0123-0002.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0124-0001.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-0124-000
2.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0012-01
25-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4/IM-0
012-0125-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Localizers_
4/IM-0012-0126-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/Local
izers_4/IM-0012-0126-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/Localizers_4/IM-0012-0127-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/Localizers_4/IM-0012-0127-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/Localizers_4/IM-0012-0128-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/Localizers_4/IM-0012-0128-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0001.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0002.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0003.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0004.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0005.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0006.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001
-0007.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6
/IM-0001-0008.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acq
MPRAGE_6/IM-0001-0009.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/ana
tT1w_acqMPRAGE_6/IM-0001-0010.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/anatT1w_acqMPRAGE_6/IM-0001-0011.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0012.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0013.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0014.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0015.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0016.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0017.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0018.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-001
9.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-
0001-0020.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRA
GE_6/IM-0001-0021.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w
_acqMPRAGE_6/IM-0001-0022.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/anatT1w_acqMPRAGE_6/IM-0001-0023.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/anatT1w_acqMPRAGE_6/IM-0001-0024.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0025.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0026.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0027.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0028.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0029.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0030.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0031.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001
-0032.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6
/IM-0001-0033.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acq
MPRAGE_6/IM-0001-0034.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/ana
tT1w_acqMPRAGE_6/IM-0001-0035.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/anatT1w_acqMPRAGE_6/IM-0001-0036.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0037.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0038.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0039.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0040.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0041.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0042.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0043.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-004
4.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-
0001-0045.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRA
GE_6/IM-0001-0046.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w
_acqMPRAGE_6/IM-0001-0047.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/anatT1w_acqMPRAGE_6/IM-0001-0048.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/anatT1w_acqMPRAGE_6/IM-0001-0049.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0050.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0051.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0052.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0053.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0054.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0055.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0056.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001
-0057.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6
/IM-0001-0058.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acq
MPRAGE_6/IM-0001-0059.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/ana
tT1w_acqMPRAGE_6/IM-0001-0060.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/anatT1w_acqMPRAGE_6/IM-0001-0061.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0062.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0063.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0064.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0065.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0066.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0067.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0068.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-006
9.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-
0001-0070.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRA
GE_6/IM-0001-0071.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w
_acqMPRAGE_6/IM-0001-0072.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/anatT1w_acqMPRAGE_6/IM-0001-0073.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/anatT1w_acqMPRAGE_6/IM-0001-0074.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0075.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0076.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0077.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0078.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0079.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0080.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0081.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0082.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0083.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0
084.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/I
M-0001-0085.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMP
RAGE_6/IM-0001-0086.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0087.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/anatT1w_acqMPRAGE_6/IM-0001-0088.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0089.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0090.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0091.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0092.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0093.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0094.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0095.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0096.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-00
01-0097.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE
_6/IM-0001-0098.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_a
cqMPRAGE_6/IM-0001-0099.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/a
natT1w_acqMPRAGE_6/IM-0001-0100.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/anatT1w_acqMPRAGE_6/IM-0001-0101.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0102.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0103.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0104.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0105.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0106.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0107.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0108.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0
109.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/I
M-0001-0110.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMP
RAGE_6/IM-0001-0111.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0112.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/anatT1w_acqMPRAGE_6/IM-0001-0113.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0114.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0115.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0116.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0117.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0118.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0119.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0120.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0121.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-00
01-0122.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE
_6/IM-0001-0123.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_a
cqMPRAGE_6/IM-0001-0124.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/a
natT1w_acqMPRAGE_6/IM-0001-0125.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/anatT1w_acqMPRAGE_6/IM-0001-0126.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0127.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0128.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0129.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0130.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0131.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0132.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0133.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0
134.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/I
M-0001-0135.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMP
RAGE_6/IM-0001-0136.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0137.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/anatT1w_acqMPRAGE_6/IM-0001-0138.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0139.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0140.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0141.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0142.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0143.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0144.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0145.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0146.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-00
01-0147.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE
_6/IM-0001-0148.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_a
cqMPRAGE_6/IM-0001-0149.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/a
natT1w_acqMPRAGE_6/IM-0001-0150.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/anatT1w_acqMPRAGE_6/IM-0001-0151.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0152.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0153.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0154.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0155.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0156.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0157.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0158.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0
159.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/I
M-0001-0160.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMP
RAGE_6/IM-0001-0161.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0162.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/anatT1w_acqMPRAGE_6/IM-0001-0163.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0164.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0165.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0166.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0167.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0168.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0169.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0170.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0171.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-00
01-0172.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE
_6/IM-0001-0173.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_a
cqMPRAGE_6/IM-0001-0174.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/a
natT1w_acqMPRAGE_6/IM-0001-0175.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/anatT1w_acqMPRAGE_6/IM-0001-0176.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0177.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0178.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0179.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0180.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0181.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0182.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0183.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0
184.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/I
M-0001-0185.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMP
RAGE_6/IM-0001-0186.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0187.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/anatT1w_acqMPRAGE_6/IM-0001-0188.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0189.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0190.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0191.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0192.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0193.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0194.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0195.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0196.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-00
01-0197.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE
_6/IM-0001-0198.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_a
cqMPRAGE_6/IM-0001-0199.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/a
natT1w_acqMPRAGE_6/IM-0001-0200.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/anatT1w_acqMPRAGE_6/IM-0001-0201.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0202.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0203.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0204.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0205.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0206.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0207.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0208.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0
209.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/I
M-0001-0210.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMP
RAGE_6/IM-0001-0211.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0212.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/anatT1w_acqMPRAGE_6/IM-0001-0213.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0214.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0215.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0216.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0217.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0218.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0219.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0220.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0221.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-00
01-0222.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE
_6/IM-0001-0223.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_a
cqMPRAGE_6/IM-0001-0224.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/a
natT1w_acqMPRAGE_6/IM-0001-0225.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/anatT1w_acqMPRAGE_6/IM-0001-0226.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0227.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0228.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0229.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0230.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0231.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0232.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0233.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0
234.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6/I
M-0001-0235.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMP
RAGE_6/IM-0001-0236.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0237.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/anatT1w_acqMPRAGE_6/IM-0001-0238.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0239.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/anatT1w_acqMPRAGE_6/IM-0001-0240.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0001.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0002.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0003.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0004.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0005.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0006.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0007.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0008.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0009.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0010.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0011.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0012.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0013.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0014.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0015.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/dwi_dirAP_9/IM-0004-0016.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0001-0001.dcm (file) [from origin...]
get(ok): REPR
OIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0001-0002.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0002-0001.dcm (file) [from origin...]

get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0002-0002.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0003-0001.dcm (file) [f
rom origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0003-0002.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0004-0001
.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-00
04-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-
0002-0005-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4m
m_7/IM-0002-0005-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fma
p_acq4mm_7/IM-0002-0006-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
- 1/fmap_acq4mm_7/IM-0002-0006-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/fmap_acq4mm_7/IM-0002-0007-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pa
tterson_Coben - 1/fmap_acq4mm_7/IM-0002-0007-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0008-0001.dcm (file) [from origin...]
get(ok): REPROI
N/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0008-0002.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0009-0001.dcm (file) [from origin...]
g
et(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0009-0002.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0010-0001.dcm (file) [fro
m origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0010-0002.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0011-0001.d
cm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0011
-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-00
02-0012-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_
7/IM-0002-0012-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_
acq4mm_7/IM-0002-0013-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
1/fmap_acq4mm_7/IM-0002-0013-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/fmap_acq4mm_7/IM-0002-0014-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patt
erson_Coben - 1/fmap_acq4mm_7/IM-0002-0014-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0015-0001.dcm (file) [from origin...]
get(ok): REPROIN/
dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0015-0002.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0016-0001.dcm (file) [from origin...]
get
(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0016-0002.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0017-0001.dcm (file) [from
origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0017-0002.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0018-0001.dcm
 (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0018-0
002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002
-0019-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/
IM-0002-0019-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_ac
q4mm_7/IM-0002-0020-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/
fmap_acq4mm_7/IM-0002-0020-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/fmap_acq4mm_7/IM-0002-0021-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patter
son_Coben - 1/fmap_acq4mm_7/IM-0002-0021-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0022-0001.dcm (file) [from origin...]
get(ok): REPROIN/di
com/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0022-0002.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0023-0001.dcm (file) [from origin...]
get(o
k): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0023-0002.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0024-0001.dcm (file) [from or
igin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0024-0002.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0025-0001.dcm (
file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0025-000
2.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0
026-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM
-0002-0026-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4
mm_7/IM-0002-0027-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fm
ap_acq4mm_7/IM-0002-0027-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/fmap_acq4mm_7/IM-0002-0028-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterso
n_Coben - 1/fmap_acq4mm_7/IM-0002-0028-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/fmap_acq4mm_7/IM-0002-0029-0001.dcm (file) [from origin...]
get(ok): REPROIN/dico
m/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0029-0002.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0030-0001.dcm (file) [from origin...]
get(ok)
: REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0030-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0031-0001.dcm (file) [from orig
in...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0031-0002.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0032-0001.dcm (fi
le) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0032-0002.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-003
3-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0
002-0033-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm
_7/IM-0002-0034-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap
_acq4mm_7/IM-0002-0034-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/fmap_acq4mm_7/IM-0002-0035-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_
Coben - 1/fmap_acq4mm_7/IM-0002-0035-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/fmap_acq4mm_7/IM-0002-0036-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/
001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0036-0002.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0037-0001.dcm (file) [from origin...]
get(ok):
REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0037-0002.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0038-0001.dcm (file) [from origin
...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0038-0002.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0039-0001.dcm (file
) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0039-0002.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0040-
0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-000
2-0040-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7
/IM-0002-0041-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_a
cq4mm_7/IM-0002-0041-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/fmap_acq4mm_7/IM-0002-0042-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Co
ben - 1/fmap_acq4mm_7/IM-0002-0042-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/fmap_acq4mm_7/IM-0002-0043-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/00
1/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0043-0002.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0044-0001.dcm (file) [from origin...]
get(ok): RE
PROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7/IM-0002-0044-0002.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0001.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0003.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0004.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0005.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0006.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0007.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0008.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0009.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0010.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0011.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0012.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0013.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0014.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0015.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0016.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-001
7.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0
018.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003
-0019.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-00
03-0020.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-
0003-0021.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8/I
M-0003-0022.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8
/IM-0003-0023.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm
_8/IM-0003-0024.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4
mm_8/IM-0003-0025.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_ac
q4mm_8/IM-0003-0026.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_
acq4mm_8/IM-0003-0027.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fma
p_acq4mm_8/IM-0003-0028.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/f
map_acq4mm_8/IM-0003-0029.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/fmap_acq4mm_8/IM-0003-0030.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/fmap_acq4mm_8/IM-0003-0031.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/fmap_acq4mm_8/IM-0003-0032.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/fmap_acq4mm_8/IM-0003-0033.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/fmap_acq4mm_8/IM-0003-0034.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/fmap_acq4mm_8/IM-0003-0035.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/fmap_acq4mm_8/IM-0003-0036.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/fmap_acq4mm_8/IM-0003-0037.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/fmap_acq4mm_8/IM-0003-0038.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/fmap_acq4mm_8/IM-0003-0039.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0040.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0041.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0042.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0043.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/fmap_acq4mm_8/IM-0003-0044.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0001.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0002.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0003.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0004.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0005.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0006.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0007.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0008.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0009.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0010.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0011.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0012.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0013.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0014.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0015.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0016.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0017.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0018.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0019.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0020.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0021.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0022.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-002
3.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0
024.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010
-0025.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-00
10-0026.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-
0010-0027.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/I
M-0010-0028.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15
/IM-0010-0029.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_
15/IM-0010-0030.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirP
A_15/IM-0010-0031.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_di
rPA_15/IM-0010-0032.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_
dirPA_15/IM-0010-0033.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fma
p_dirPA_15/IM-0010-0034.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/f
map_dirPA_15/IM-0010-0035.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/fmap_dirPA_15/IM-0010-0036.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/fmap_dirPA_15/IM-0010-0037.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/fmap_dirPA_15/IM-0010-0038.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/fmap_dirPA_15/IM-0010-0039.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/fmap_dirPA_15/IM-0010-0040.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/fmap_dirPA_15/IM-0010-0041.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/fmap_dirPA_15/IM-0010-0042.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/fmap_dirPA_15/IM-0010-0043.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/fmap_dirPA_15/IM-0010-0044.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/fmap_dirPA_15/IM-0010-0045.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0046.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0047.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0048.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0049.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0050.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0051.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0052.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0053.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0054.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0055.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0056.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0057.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0058.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0059.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0060.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0061.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0062.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0063.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0064.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0065.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0066.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0067.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0068.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0069.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0070.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0071.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0072.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-007
3.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0
074.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010
-0075.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-00
10-0076.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-
0010-0077.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/I
M-0010-0078.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15
/IM-0010-0079.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_
15/IM-0010-0080.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirP
A_15/IM-0010-0081.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_di
rPA_15/IM-0010-0082.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_
dirPA_15/IM-0010-0083.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fma
p_dirPA_15/IM-0010-0084.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/f
map_dirPA_15/IM-0010-0085.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1
/fmap_dirPA_15/IM-0010-0086.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben -
 1/fmap_dirPA_15/IM-0010-0087.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/fmap_dirPA_15/IM-0010-0088.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Cob
en - 1/fmap_dirPA_15/IM-0010-0089.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_C
oben - 1/fmap_dirPA_15/IM-0010-0090.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson
_Coben - 1/fmap_dirPA_15/IM-0010-0091.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patters
on_Coben - 1/fmap_dirPA_15/IM-0010-0092.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patte
rson_Coben - 1/fmap_dirPA_15/IM-0010-0093.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Pat
terson_Coben - 1/fmap_dirPA_15/IM-0010-0094.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/P
atterson_Coben - 1/fmap_dirPA_15/IM-0010-0095.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001
/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0096.dcm (file) [from origin...]
get(ok): REPROIN/dicom/0
01/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0097.dcm (file) [from origin...]
get(ok): REPROIN/dicom
/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0098.dcm (file) [from origin...]
get(ok): REPROIN/dic
om/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0099.dcm (file) [from origin...]
get(ok): REPROIN/d
icom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0100.dcm (file) [from origin...]
get(ok): REPROIN
/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0101.dcm (file) [from origin...]
get(ok): REPRO
IN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0102.dcm (file) [from origin...]
get(ok): REP
ROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0103.dcm (file) [from origin...]
get(ok): R
EPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0104.dcm (file) [from origin...]
get(ok):
 REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0105.dcm (file) [from origin...]
get(ok
): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0106.dcm (file) [from origin...]
get(
ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0107.dcm (file) [from origin...]
ge
t(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0108.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0109.dcm (file) [from origin...
]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0110.dcm (file) [from origin.
..]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0111.dcm (file) [from origi
n...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0112.dcm (file) [from ori
gin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0113.dcm (file) [from o
rigin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0114.dcm (file) [from
 origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0115.dcm (file) [fr
om origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0116.dcm (file) [
from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0117.dcm (file)
 [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0118.dcm (fil
e) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0119.dcm (f
ile) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0120.dcm
(file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0121.dc
m (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0122.
dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-012
3.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010-0
124.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-0010
-0125.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-00
10-0126.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/IM-
0010-0127.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15/I
M-0010-0128.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15
/IM-0010-0129.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_
15/IM-0010-0130.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirP
A_15/IM-0010-0131.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/fmap_di
rPA_15/IM-0010-0132.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/func_
taskrest_16/IM-0011-0001.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben - 1/
func_taskrest_16/IM-0011-0002.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_Coben
 - 1/func_taskrest_16/IM-0011-0003.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001/Patterson_
Coben - 1/func_taskrest_16/IM-0011-0004.dcm (file) [from origin...]
get(ok): REPROIN/dicom/001 (dire
ctory)
action summary:
  get (ok: 792)

[INFO] Attempting a clone into /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-exa
mple 
[INFO] Attempting to clone from https://datasets.datalad.org/repronim/heudiconv-reproin-exampl
e to /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example
[INFO] Attempting to clone from https://datasets.datalad.org/repronim/heudiconv-reproin-example/.git
 to /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example
[INFO] Start enumerating objects
[INFO] Start counting objects
[INFO] Start compressing objects
[INFO] Start receiving objects
[INFO] Start resolving deltas
[INFO] Completed clone attempts for Dataset(/home/jovyan/workspace/books/examples/workflows/heudicon
v-reproin-example)

We will be working from a directory called REPROIN. Under the REPROIN directory is the dicom subdirectory: Under the subject number 001 the session Patterson_Coben - 1 is nested. Each dicom sequence folder is nested under the session:

!tree heudiconv-reproin-example/REPROIN/ -I "*.dcm"

heudiconv-reproin-example/REPROIN/
└── dicom
    └── 001
        └── Patterson_Coben - 1
            ├── Localizers_4
            ├── anatT1w_acqMPRAGE_6
            ├── dwi_dirAP_9
            ├── fmap_acq4mm_7
            ├── fmap_acq4mm_8
            ├── fmap_dirPA_15
            └── func_taskrest_16

11 directories, 0 files

2. Convert DICOMS to BIDS-formatted NIfTI

2.1. Using dcm2niix (manual workflow)

dcm2niix converts neuroimaging data from the DICOM format to the NIfTI format and generates a BIDS JSON format sidecar which includes relevant information. However, users need to manually organize these files into a bids-compliant subject directory.

2.1.1. Convert DICOM to NIfTI

import module
await module.load('dcm2niix/v1.0.20240202')

!dcm2niix -h

Chris Rorden's dcm2niiX version v1.0.20240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC8.4.0 x86-64 (64-bit Linux)
usage: dcm2niix [options] <in_folder>
 Options :
  -1..-9 : gz compression level (1=fastest..9=smallest, default 6)
  -a : adjacent DICOMs (images from same series always in same folder) for faster conversion (n/y, default n)
  -b : BIDS sidecar (y/n/o [o=only: no NIfTI], default y)
   -ba : anonymize BIDS (y/n, default y)
  -c : comment stored in NIfTI aux_file (up to 24 characters e.g. '-c VIP', empty to anonymize e.g. 0020,4000 e.g. '-c ""')
  -d : directory search depth. Convert DICOMs in sub-folders of in_folder? (0..9, default 5)
  -e : export as NRRD (y) or MGH (o) or JSON/JNIfTI (j) or BJNIfTI (b) instead of NIfTI (y/n/o/j/b, default n)
  -f : filename (%a=antenna (coil) name, %b=basename, %c=comments, %d=description, %e=echo number, %f=folder name, %g=accession number, %i=ID of patient, %j=seriesInstanceUID, %k=studyInstanceUID, %m=manufacturer, %n=name of patient, %o=mediaObjectInstanceUID, %p=protocol, %r=instance number, %s=series number, %t=time, %u=acquisition number, %v=vendor, %x=study ID; %z=sequence name; default '%f_%p_%t_%s')
  -g : generate defaults file (y/n/o/i [o=only: reset and write defaults; i=ignore: reset defaults], default n)
  -h : show help
  -i : ignore derived, localizer and 2D images (y/n, default n)
  -l : losslessly scale 16-bit integers to use dynamic range (y/n/o [yes=scale, no=no, but uint16->int16, o=original], default o)
  -m : merge 2D slices from same series regardless of echo, exposure, etc. (n/y or 0/1/2, default 2) [no, yes, auto]
  -n : only convert this series CRC number - can be used up to 16 times (default convert all)
  -o : output directory (omit to save to input folder)
  -p : Philips precise float (not display) scaling (y/n, default y)
  -q : only search directory for DICOMs (y/l/n, default y) [y=show number of DICOMs found, l=additionally list DICOMs found, n=no]
  -r : rename instead of convert DICOMs (y/n, default n)
  -s : single file mode, do not convert other images in folder (y/n, default n)
  -u : up-to-date check
  -v : verbose (n/y or 0/1/2, default 0) [no, yes, logorrheic]
  -w : write behavior for name conflicts (0,1,2, default 2: 0=skip duplicates, 1=overwrite, 2=add suffix)
  -x : crop 3D acquisitions (y/n/i, default n, use 'i'gnore to neither crop nor rotate 3D acquistions)
  -z : gz compress images (y/o/i/n/3, default n) [y=pigz, o=optimal pigz, i=internal:zlib, n=no, 3=no,3D]
  --big-endian : byte order (y/n/o, default o) [y=big-end, n=little-end, o=optimal/native]
  --progress : Slicer format progress information (y/n, default n)
  --ignore_trigger_times : disregard values in 0018,1060 and 0020,9153
  --terse : omit filename post-fixes (can cause overwrites)
  --version : report version
  --xml : Slicer format features
 Defaults file : /home/jovyan/.dcm2nii.ini
 Examples :
  dcm2niix /Users/chris/dir
  dcm2niix -c "my comment" /Users/chris/dir
  dcm2niix -o /users/cr/outdir/ -z y ~/dicomdir
  dcm2niix -f %p_%s -b y -ba n ~/dicomdir
  dcm2niix -f mystudy%s ~/dicomdir
  dcm2niix -o "~/dir with spaces/dir" ~/dicomdir
Example output filename: 'myFolder_MPRAGE_19770703150928_1.nii'

!mkdir -p dcm2niix_bids
!dcm2niix n -o ./dcm2niix_bids ./heudiconv-reproin-example/REPROIN/dicom

Chris Rorden's dcm2niiX version v1.0.20240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC8.4.0 x86-64 (64-bit Linux)
Found 791 DICOM file(s)
Slices not stacked: orientation varies (vNav or localizer?) [0.0964069 0.780133 0.618141 0.0553476 0.615871 -0.7859] != [-0.522168 0.736033 0.430808 0.0695744 0.540223 -0.838641]
Convert 2 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_3_i00001 (162x162x2x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_3_i00004 (162x162x1x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_3_i00002 (162x162x1x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_3_i00003 (162x162x1x1)
Convert 128 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_1 (160x160x128x1)
Convert 128 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_2 (160x160x128x1)
Convert 4 DICOM as ./dcm2niix_bids/dicom_func_task-rest_20190208142838_16 (64x64x44x4)
Convert 132 DICOM as ./dcm2niix_bids/dicom_fmap_dir-PA_20190208142838_15 (122x122x66x2)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_4_i00002 (162x162x1x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_4_i00003 (162x162x1x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_4_i00001 (162x162x1x1)
Convert 16 DICOM as ./dcm2niix_bids/dicom_dwi_dir-AP_20190208142838_9 (122x122x66x16)
Slices not stacked: echo varies (TE 4.92, 7.38; echo 1, 2). Use 'merge 2D slices' option to force stacking
Convert 44 DICOM as ./dcm2niix_bids/dicom_fmap_acq-4mm_20190208142838_7_e1 (64x64x44x1)
Convert 44 DICOM as ./dcm2niix_bids/dicom_fmap_acq-4mm_20190208142838_7_e2 (64x64x44x1)
Convert 240 DICOM as ./dcm2niix_bids/dicom_anat-T1w_acq-MPRAGE_20190208142838_6 (224x224x240x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_5_i00003 (162x162x1x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_5_i00001 (162x162x1x1)
Convert 1 DICOM as ./dcm2niix_bids/dicom_anat-scout_20190208142838_5_i00002 (162x162x1x1)
Convert 44 DICOM as ./dcm2niix_bids/dicom_fmap_acq-4mm_20190208142838_8_e2_ph (64x64x44x1)
Conversion required 0.722557 seconds (0.640038 for core code).

2.1.2. Organize data into BIDS structure

%%bash
mkdir -p ./dcm2niix_bids/anat
mkdir -p ./dcm2niix_bids/fmap
mkdir -p ./dcm2niix_bids/dwi
mkdir -p ./dcm2niix_bids/func

find ./dcm2niix_bids -maxdepth 1 -type f -name *anat* -exec mv {} ./dcm2niix_bids/anat \;
find ./dcm2niix_bids -maxdepth 1 -type f -name *fmap* -exec mv {} ./dcm2niix_bids/fmap \;
find ./dcm2niix_bids -maxdepth 1 -type f -name *dwi* -exec mv {} ./dcm2niix_bids/dwi \;
find ./dcm2niix_bids -maxdepth 1 -type f -name *func* -exec mv {} ./dcm2niix_bids/func \;

!tree ./dcm2niix_bids/

./dcm2niix_bids/
├── anat
│   ├── dicom_anat-T1w_acq-MPRAGE_20190208142838_6.json
│   ├── dicom_anat-T1w_acq-MPRAGE_20190208142838_6.nii
│   ├── dicom_anat-scout_20190208142838_1.json
│   ├── dicom_anat-scout_20190208142838_1.nii
│   ├── dicom_anat-scout_20190208142838_2.json
│   ├── dicom_anat-scout_20190208142838_2.nii
│   ├── dicom_anat-scout_20190208142838_3_i00001.json
│   ├── dicom_anat-scout_20190208142838_3_i00001.nii
│   ├── dicom_anat-scout_20190208142838_3_i00002.json
│   ├── dicom_anat-scout_20190208142838_3_i00002.nii
│   ├── dicom_anat-scout_20190208142838_3_i00003.json
│   ├── dicom_anat-scout_20190208142838_3_i00003.nii
│   ├── dicom_anat-scout_20190208142838_3_i00004.json
│   ├── dicom_anat-scout_20190208142838_3_i00004.nii
│   ├── dicom_anat-scout_20190208142838_4_i00001.json
│   ├── dicom_anat-scout_20190208142838_4_i00001.nii
│   ├── dicom_anat-scout_20190208142838_4_i00002.json
│   ├── dicom_anat-scout_20190208142838_4_i00002.nii
│   ├── dicom_anat-scout_20190208142838_4_i00003.json
│   ├── dicom_anat-scout_20190208142838_4_i00003.nii
│   ├── dicom_anat-scout_20190208142838_5_i00001.json
│   ├── dicom_anat-scout_20190208142838_5_i00001.nii
│   ├── dicom_anat-scout_20190208142838_5_i00002.json
│   ├── dicom_anat-scout_20190208142838_5_i00002.nii
│   ├── dicom_anat-scout_20190208142838_5_i00003.json
│   └── dicom_anat-scout_20190208142838_5_i00003.nii
├── dwi
│   ├── dicom_dwi_dir-AP_20190208142838_9.bval
│   ├── dicom_dwi_dir-AP_20190208142838_9.bvec
│   ├── dicom_dwi_dir-AP_20190208142838_9.json
│   └── dicom_dwi_dir-AP_20190208142838_9.nii
├── fmap
│   ├── dicom_fmap_acq-4mm_20190208142838_7_e1.json
│   ├── dicom_fmap_acq-4mm_20190208142838_7_e1.nii
│   ├── dicom_fmap_acq-4mm_20190208142838_7_e2.json
│   ├── dicom_fmap_acq-4mm_20190208142838_7_e2.nii
│   ├── dicom_fmap_acq-4mm_20190208142838_8_e2_ph.json
│   ├── dicom_fmap_acq-4mm_20190208142838_8_e2_ph.nii
│   ├── dicom_fmap_dir-PA_20190208142838_15.bval
│   ├── dicom_fmap_dir-PA_20190208142838_15.bvec
│   ├── dicom_fmap_dir-PA_20190208142838_15.json
│   └── dicom_fmap_dir-PA_20190208142838_15.nii
└── func
    ├── dicom_func_task-rest_20190208142838_16.json
    └── dicom_func_task-rest_20190208142838_16.nii

5 directories, 42 files

2.2. Using HeuDiConv (automated workflow)

Typical use of heudiconv will require the creation and editing of your heuristics file.

But heudiconv also comes with existing heuristics which can be used as is, like convertall or ReproIn could be immediately reused and represent two ends of the spectrum in heuristics:

• convertall is very simple and does not automate anything – it is for a user to modify filenames in the prepared conversion table, and then rerun with -c dcm2niix

• reproin can be used fully automated, if original sequences were named according to its ReproIn convention.

await module.load('heudiconv/1.3.1')

!heudiconv -f reproin -b -o ./heudiconv_reproin_bids --files ./heudiconv-reproin-example/REPROIN/dicom/001

WARNING: Could not check for version updates: Connection to server could not be made
INFO: Running heudiconv version 1.3.1 latest Unknown
INFO: Analyzing 791 dicoms
INFO: Filtering out 0 dicoms based on their filename
INFO: Generated sequence info for 1 studies with 11 entries total
INFO: Processing sequence infos to deduce study/session
INFO: Study session for StudySessionInfo(locator='Patterson/Coben', session=None, subject='001')
INFO: Need to process 1 study sessions
INFO: PROCESSING STARTS: {'subject': '001', 'outdir': '/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben', 'session': None}
INFO: Processing 11 pre-sorted seqinfo entries
INFO: Processing 11 seqinfo entries
WARNING: Deduced datatype to be dwi from DICOM, but got fmap out of fmap_dir-PA
WARNING: Detected 4 duplicated run(s) for template {bids_subject_session_dir}/anat/{bids_subject_session_prefix}_scout: ['1-anat-scout', '2-anat-scout', '3-anat-scout', '4-anat-scout']
INFO: Doing conversion using dcm2niix
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_scout (3 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat . Converter: dcm2niix . Output types: ('dicom',)
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_acq-MPRAGE_T1w (240 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat . Converter: dcm2niix . Output types: ('nii.gz', 'dicom')
260310-05:56:33,74 nipype.workflow INFO:
	 [Node] Setting-up "convert" in "/tmp/dcm2niixlyzifo1i/convert".
INFO: [Node] Setting-up "convert" in "/tmp/dcm2niixlyzifo1i/convert".
260310-05:56:33,290 nipype.workflow INFO:
	 [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
INFO: [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
260310-05:56:34,155 nipype.interface INFO:
	 stdout 2026-03-10T05:56:34.155115:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
INFO: stdout 2026-03-10T05:56:34.155115:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
260310-05:56:34,155 nipype.interface INFO:
	 stdout 2026-03-10T05:56:34.155115:Found 240 DICOM file(s)
INFO: stdout 2026-03-10T05:56:34.155115:Found 240 DICOM file(s)
260310-05:56:34,155 nipype.interface INFO:
	 stdout 2026-03-10T05:56:34.155115:Convert 240 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_acq-MPRAGE_T1w_heudiconv118 (224x224x240x1)
INFO: stdout 2026-03-10T05:56:34.155115:Convert 240 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_acq-MPRAGE_T1w_heudiconv118 (224x224x240x1)
260310-05:56:35,198 nipype.interface INFO:
	 stdout 2026-03-10T05:56:35.198077:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_acq-MPRAGE_T1w_heudiconv118.nii"
INFO: stdout 2026-03-10T05:56:35.198077:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_acq-MPRAGE_T1w_heudiconv118.nii"
260310-05:56:35,198 nipype.interface INFO:
	 stdout 2026-03-10T05:56:35.198077:Conversion required 1.198471 seconds (0.295420 for core code).
INFO: stdout 2026-03-10T05:56:35.198077:Conversion required 1.198471 seconds (0.295420 for core code).
260310-05:56:35,232 nipype.workflow INFO:
	 [Node] Finished "convert", elapsed time 1.3843s.
INFO: [Node] Finished "convert", elapsed time 1.3843s.
260310-05:56:57,274 nipype.workflow INFO:
	 [Node] Setting-up "embedder" in "/tmp/embedmeta32t_djq3/embedder".
INFO: [Node] Setting-up "embedder" in "/tmp/embedmeta32t_djq3/embedder".
260310-05:56:57,287 nipype.workflow INFO:
	 [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
INFO: [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
260310-05:57:02,177 nipype.workflow INFO:
	 [Node] Finished "embedder", elapsed time 4.889375s.
INFO: [Node] Finished "embedder", elapsed time 4.889375s.
INFO: Post-treating /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_acq-MPRAGE_T1w.json file
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude (88 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap . Converter: dcm2niix . Output types: ('nii.gz', 'dicom')
260310-05:57:02,227 nipype.workflow INFO:
	 [Node] Setting-up "convert" in "/tmp/dcm2niixjdqh1l5p/convert".
INFO: [Node] Setting-up "convert" in "/tmp/dcm2niixjdqh1l5p/convert".
260310-05:57:02,262 nipype.workflow INFO:
	 [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
INFO: [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
260310-05:57:02,362 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.361892:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
INFO: stdout 2026-03-10T05:57:02.361892:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
260310-05:57:02,362 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.361892:Found 88 DICOM file(s)
INFO: stdout 2026-03-10T05:57:02.361892:Found 88 DICOM file(s)
260310-05:57:02,362 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.361892:Slices not stacked: echo varies (TE 4.92, 7.38; echo 1, 2). Use 'merge 2D slices' option to force stacking
INFO: stdout 2026-03-10T05:57:02.361892:Slices not stacked: echo varies (TE 4.92, 7.38; echo 1, 2). Use 'merge 2D slices' option to force stacking
260310-05:57:02,362 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.361892:Convert 44 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e1 (64x64x44x1)
INFO: stdout 2026-03-10T05:57:02.361892:Convert 44 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e1 (64x64x44x1)
260310-05:57:02,400 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.400722:Compress: "/usr/bin/pigz" -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e1.nii"
INFO: stdout 2026-03-10T05:57:02.400722:Compress: "/usr/bin/pigz" -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e1.nii"
260310-05:57:02,400 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.400722:Convert 44 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e2 (64x64x44x1)
INFO: stdout 2026-03-10T05:57:02.400722:Convert 44 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e2 (64x64x44x1)
260310-05:57:02,514 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.513918:Compress: "/usr/bin/pigz" -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e2.nii"
INFO: stdout 2026-03-10T05:57:02.513918:Compress: "/usr/bin/pigz" -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_magnitude_heudiconv073_e2.nii"
260310-05:57:02,514 nipype.interface INFO:
	 stdout 2026-03-10T05:57:02.513918:Conversion required 0.180691 seconds (0.032508 for core code).
INFO: stdout 2026-03-10T05:57:02.513918:Conversion required 0.180691 seconds (0.032508 for core code).
260310-05:57:02,559 nipype.workflow INFO:
	 [Node] Finished "convert", elapsed time 0.296175s.
INFO: [Node] Finished "convert", elapsed time 0.296175s.
WARNING: For now not embedding BIDS and info generated .nii.gz itself since sequence produced multiple files
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_phasediff (44 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap . Converter: dcm2niix . Output types: ('nii.gz', 'dicom')
260310-05:57:03,332 nipype.workflow INFO:
	 [Node] Setting-up "convert" in "/tmp/dcm2niixyzq751rk/convert".
INFO: [Node] Setting-up "convert" in "/tmp/dcm2niixyzq751rk/convert".
260310-05:57:03,350 nipype.workflow INFO:
	 [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
INFO: [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
260310-05:57:03,695 nipype.interface INFO:
	 stdout 2026-03-10T05:57:03.695653:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
INFO: stdout 2026-03-10T05:57:03.695653:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
260310-05:57:03,695 nipype.interface INFO:
	 stdout 2026-03-10T05:57:03.695653:Found 44 DICOM file(s)
INFO: stdout 2026-03-10T05:57:03.695653:Found 44 DICOM file(s)
260310-05:57:03,696 nipype.interface INFO:
	 stdout 2026-03-10T05:57:03.695653:Convert 44 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_phasediff_heudiconv956_e2_ph (64x64x44x1)
INFO: stdout 2026-03-10T05:57:03.695653:Convert 44 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_phasediff_heudiconv956_e2_ph (64x64x44x1)
260310-05:57:03,794 nipype.interface INFO:
	 stdout 2026-03-10T05:57:03.794622:Compress: "/usr/bin/pigz" -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_phasediff_heudiconv956_e2_ph.nii"
INFO: stdout 2026-03-10T05:57:03.794622:Compress: "/usr/bin/pigz" -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_phasediff_heudiconv956_e2_ph.nii"
260310-05:57:03,794 nipype.interface INFO:
	 stdout 2026-03-10T05:57:03.794622:Conversion required 0.113516 seconds (0.014353 for core code).
INFO: stdout 2026-03-10T05:57:03.794622:Conversion required 0.113516 seconds (0.014353 for core code).
260310-05:57:03,816 nipype.workflow INFO:
	 [Node] Finished "convert", elapsed time 0.46467s.
INFO: [Node] Finished "convert", elapsed time 0.46467s.
260310-05:57:04,202 nipype.workflow INFO:
	 [Node] Setting-up "embedder" in "/tmp/embedmetas0vpw6f6/embedder".
INFO: [Node] Setting-up "embedder" in "/tmp/embedmetas0vpw6f6/embedder".
260310-05:57:04,207 nipype.workflow INFO:
	 [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
INFO: [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
260310-05:57:05,257 nipype.workflow INFO:
	 [Node] Finished "embedder", elapsed time 1.049176s.
INFO: [Node] Finished "embedder", elapsed time 1.049176s.
INFO: Post-treating /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_acq-4mm_phasediff.json file
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/dwi/sub-001_dir-AP_dwi (16 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/dwi . Converter: dcm2niix . Output types: ('nii.gz', 'dicom')
260310-05:57:05,271 nipype.workflow INFO:
	 [Node] Setting-up "convert" in "/tmp/dcm2niixr0cvb9yg/convert".
INFO: [Node] Setting-up "convert" in "/tmp/dcm2niixr0cvb9yg/convert".
260310-05:57:05,277 nipype.workflow INFO:
	 [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
INFO: [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
260310-05:57:05,465 nipype.interface INFO:
	 stdout 2026-03-10T05:57:05.465244:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
INFO: stdout 2026-03-10T05:57:05.465244:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
260310-05:57:05,465 nipype.interface INFO:
	 stdout 2026-03-10T05:57:05.465244:Found 16 DICOM file(s)
INFO: stdout 2026-03-10T05:57:05.465244:Found 16 DICOM file(s)
260310-05:57:05,465 nipype.interface INFO:
	 stdout 2026-03-10T05:57:05.465244:Convert 16 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/dwi/sub-001_dir-AP_dwi_heudiconv598 (122x122x66x16)
INFO: stdout 2026-03-10T05:57:05.465244:Convert 16 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/dwi/sub-001_dir-AP_dwi_heudiconv598 (122x122x66x16)
260310-05:57:06,634 nipype.interface INFO:
	 stdout 2026-03-10T05:57:06.633916:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/dwi/sub-001_dir-AP_dwi_heudiconv598.nii"
INFO: stdout 2026-03-10T05:57:06.633916:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/dwi/sub-001_dir-AP_dwi_heudiconv598.nii"
260310-05:57:06,634 nipype.interface INFO:
	 stdout 2026-03-10T05:57:06.633916:Conversion required 1.230629 seconds (0.096870 for core code).
INFO: stdout 2026-03-10T05:57:06.633916:Conversion required 1.230629 seconds (0.096870 for core code).
260310-05:57:06,662 nipype.workflow INFO:
	 [Node] Finished "convert", elapsed time 1.383438s.
INFO: [Node] Finished "convert", elapsed time 1.383438s.
260310-05:57:25,558 nipype.workflow INFO:
	 [Node] Setting-up "embedder" in "/tmp/embedmetardge4qis/embedder".
INFO: [Node] Setting-up "embedder" in "/tmp/embedmetardge4qis/embedder".
260310-05:57:25,563 nipype.workflow INFO:
	 [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
INFO: [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
260310-05:57:26,368 nipype.workflow INFO:
	 [Node] Finished "embedder", elapsed time 0.803866s.
INFO: [Node] Finished "embedder", elapsed time 0.803866s.
INFO: Post-treating /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/dwi/sub-001_dir-AP_dwi.json file
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_dir-PA_epi (132 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap . Converter: dcm2niix . Output types: ('nii.gz', 'dicom')
260310-05:57:26,399 nipype.workflow INFO:
	 [Node] Setting-up "convert" in "/tmp/dcm2niix1j_z40tb/convert".
INFO: [Node] Setting-up "convert" in "/tmp/dcm2niix1j_z40tb/convert".
260310-05:57:26,452 nipype.workflow INFO:
	 [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
INFO: [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
260310-05:57:26,802 nipype.interface INFO:
	 stdout 2026-03-10T05:57:26.802232:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
INFO: stdout 2026-03-10T05:57:26.802232:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
260310-05:57:26,802 nipype.interface INFO:
	 stdout 2026-03-10T05:57:26.802232:Found 132 DICOM file(s)
INFO: stdout 2026-03-10T05:57:26.802232:Found 132 DICOM file(s)
260310-05:57:26,802 nipype.interface INFO:
	 stdout 2026-03-10T05:57:26.802232:Convert 132 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_dir-PA_epi_heudiconv372 (122x122x66x2)
INFO: stdout 2026-03-10T05:57:26.802232:Convert 132 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_dir-PA_epi_heudiconv372 (122x122x66x2)
260310-05:57:27,151 nipype.interface INFO:
	 stdout 2026-03-10T05:57:27.151662:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_dir-PA_epi_heudiconv372.nii"
INFO: stdout 2026-03-10T05:57:27.151662:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_dir-PA_epi_heudiconv372.nii"
260310-05:57:27,151 nipype.interface INFO:
	 stdout 2026-03-10T05:57:27.151662:Conversion required 0.423640 seconds (0.068152 for core code).
INFO: stdout 2026-03-10T05:57:27.151662:Conversion required 0.423640 seconds (0.068152 for core code).
260310-05:57:27,177 nipype.workflow INFO:
	 [Node] Finished "convert", elapsed time 0.724232s.
INFO: [Node] Finished "convert", elapsed time 0.724232s.
260310-05:57:29,864 nipype.workflow INFO:
	 [Node] Setting-up "embedder" in "/tmp/embedmeta8fmd025i/embedder".
INFO: [Node] Setting-up "embedder" in "/tmp/embedmeta8fmd025i/embedder".
260310-05:57:29,874 nipype.workflow INFO:
	 [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
INFO: [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
260310-05:57:33,904 nipype.workflow INFO:
	 [Node] Finished "embedder", elapsed time 4.028844s.
INFO: [Node] Finished "embedder", elapsed time 4.028844s.
INFO: Post-treating /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/fmap/sub-001_dir-PA_epi.json file
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/func/sub-001_task-rest_bold (4 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/func . Converter: dcm2niix . Output types: ('nii.gz', 'dicom')
260310-05:57:33,927 nipype.workflow INFO:
	 [Node] Setting-up "convert" in "/tmp/dcm2niixn5n9wjjm/convert".
INFO: [Node] Setting-up "convert" in "/tmp/dcm2niixn5n9wjjm/convert".
260310-05:57:33,935 nipype.workflow INFO:
	 [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
INFO: [Node] Executing "convert" <nipype.interfaces.dcm2nii.Dcm2niix>
260310-05:57:34,167 nipype.interface INFO:
	 stdout 2026-03-10T05:57:34.167769:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
INFO: stdout 2026-03-10T05:57:34.167769:Chris Rorden's dcm2niiX version v1.0.20220720  (JP2:OpenJPEG) (JP-LS:CharLS) GCC10.2.1 x86-64 (64-bit Linux)
260310-05:57:34,168 nipype.interface INFO:
	 stdout 2026-03-10T05:57:34.167769:Found 4 DICOM file(s)
INFO: stdout 2026-03-10T05:57:34.167769:Found 4 DICOM file(s)
260310-05:57:34,168 nipype.interface INFO:
	 stdout 2026-03-10T05:57:34.167769:Convert 4 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/func/sub-001_task-rest_bold_heudiconv855 (64x64x44x4)
INFO: stdout 2026-03-10T05:57:34.167769:Convert 4 DICOM as /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/func/sub-001_task-rest_bold_heudiconv855 (64x64x44x4)
260310-05:57:34,380 nipype.interface INFO:
	 stdout 2026-03-10T05:57:34.380223:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/func/sub-001_task-rest_bold_heudiconv855.nii"
INFO: stdout 2026-03-10T05:57:34.380223:Compress: "/usr/bin/pigz" -b 960 -n -f -6 "/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/func/sub-001_task-rest_bold_heudiconv855.nii"
260310-05:57:34,380 nipype.interface INFO:
	 stdout 2026-03-10T05:57:34.380223:Conversion required 0.219340 seconds (0.008821 for core code).
INFO: stdout 2026-03-10T05:57:34.380223:Conversion required 0.219340 seconds (0.008821 for core code).
260310-05:57:34,426 nipype.workflow INFO:
	 [Node] Finished "convert", elapsed time 0.489421s.
INFO: [Node] Finished "convert", elapsed time 0.489421s.
260310-05:57:34,695 nipype.workflow INFO:
	 [Node] Setting-up "embedder" in "/tmp/embedmetao8jmd80h/embedder".
INFO: [Node] Setting-up "embedder" in "/tmp/embedmetao8jmd80h/embedder".
260310-05:57:34,699 nipype.workflow INFO:
	 [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
INFO: [Node] Executing "embedder" <nipype.interfaces.utility.wrappers.Function>
260310-05:57:34,840 nipype.workflow INFO:
	 [Node] Finished "embedder", elapsed time 0.14031s.
INFO: [Node] Finished "embedder", elapsed time 0.14031s.
INFO: Post-treating /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/func/sub-001_task-rest_bold.json file
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_scout__dup-01 (128 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat . Converter: dcm2niix . Output types: ('dicom',)
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_scout__dup-02 (128 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat . Converter: dcm2niix . Output types: ('dicom',)
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_scout__dup-03 (5 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat . Converter: dcm2niix . Output types: ('dicom',)
INFO: Converting /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat/sub-001_scout__dup-04 (3 DICOMs) -> /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001/anat . Converter: dcm2niix . Output types: ('dicom',)
INFO: Adding "IntendedFor" to the fieldmaps in /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben/sub-001.
INFO: Populating template files under /home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben
INFO: PROCESSING DONE: {'subject': '001', 'outdir': '/home/jovyan/workspace/books/examples/workflows/heudiconv_reproin_bids/Patterson/Coben', 'session': None}

2.3. Using bidscoin (automated workflow)

BIDScoin requires the source data repository to be organized according to a subject/[session]/data structure where data folder can be structured in DICOM series layout, DICOMDIR layout, flat DICOM layout. Refer to this doc for more details.

To perform BIDS conversion, run:

• (1a) bidsmapper command

• once bidsmapper finishes, it automatically launches (1b) the bidseditor. Note: The --automated flag skips the manual editing step with bidseditor

• (2) bidscoiner command

import module
await module.load('bidscoin/4.3.3')

%%bash
mkdir -p bidscoin_bids
bidsmapper ./heudiconv-reproin-example/REPROIN/dicom ./bidscoin_bids --subprefix '00' --sesprefix 'Patterson_Coben' --automated  # Scans your data and creates a study bidsmap non-interactively
bidscoiner ./heudiconv-reproin-example/REPROIN/dicom ./bidscoin_bids    # Converts your data to BIDS using the study bidsmap

Creating BIDScoin configuration:
-> /home/jovyan/.bidscoin/4.3.3+qt5/config.toml
-> /home/jovyan/.bi
dscoin/4.3.3+qt5/templates/bidsmap_dccn.yaml
-> /home/jovyan/.bidscoin/4.3.3+qt5/templates/bidsmap_b
ids2bids.yaml
-> /home/jovyan/.bidscoin/4.3.3+qt5/templates/bidsmap_sst.yaml
-> /home/jovyan/.bidsco
in/4.3.3+qt5/templates/schema.json

INFO | 
INFO | -------------- START BIDSmapper ------------
INFO | >>> bidsmapper sourcefolder=/home/jovyan/workspace/books/examples/workflows/heudiconv-reproin
-example/REPROIN/dicom bidsfolder=/home/jovyan/workspace/books/examples/workflows/bidscoin_bids bids
map=bidsmap.yaml template=/home/jovyan/.bidscoin/4.3.3+qt5/templates/bidsmap_dccn.yaml plugins=[] su
bprefix=00 sesprefix=Patterson_Coben store=False force=False
INFO | No existing bidsmap file found: /home/jovyan/workspace/books/examples/workflows/bidscoin_bids
/code/bidscoin/bidsmap.yaml
INFO | Reading: /home/jovyan/.bidscoin/4.3.3+qt5/templates/bidsmap_dccn.
yaml
INFO | generated new fontManager
INFO | Checking the bidsmap run-items:
SUCCESS | All datatypes and options in the template bidsmap are valid
INFO
 | Mapping: /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/
001/Patterson_Coben - 1 (subject 1/1)
  0%|          | 0/1 [00:00<?, ?subject/s]
VERBOSE | Executing plugin: dcm2niix2bids -> /home/jovyan/workspac
e/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1
  0%|3
2m          | 0/1 [00:00<?, ?subject/s]
INFO | Discovered 'exclude' DICOM sample: /home/jovyan/w
orkspace/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/Lo
calizers_4/IM-0012-0001-0001.dcm
  0%|          | 0/1 [00:01<?, ?subject/s]
INFO | Discovered 'anat' DICOM sample: /home/jovyan/work
space/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/anatT
1w_acqMPRAGE_6/IM-0001-0001.dcm
  0%|          | 0/1 [00:01<?, ?subject/s]
INFO | Discovered 'dwi' DICOM sample: /home/jovyan/works
pace/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/dwi_di
rAP_9/IM-0004-0001.dcm
  0%|          | 0/1 [00:01<?, ?subject/s]
INFO | Discovered 'fmap' DICOM sample: /home/jovyan/work
space/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/fmap_
acq4mm_7/IM-0002-0001-0001.dcm
  0%|          | 0/1 [00:01<?, ?subject/s]
INFO | Discovered 'fmap' DICOM sample: /home/jovyan/work
space/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/fmap_
acq4mm_8/IM-0003-0001.dcm
  0%|          | 0/1 [00:01<?, ?subject/s]
INFO | Discovered 'fmap' DICOM sample: /home/jovyan/work
space/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/fmap_
dirPA_15/IM-0010-0001.dcm
  0%|          | 0/1 [00:01<?, ?subject/s]
INFO | Discovered 'func' DICOM sample: /home/jovyan/work
space/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/func_
taskrest_16/IM-0011-0001.dcm
100%|██
████████| 1/1 [00:01<00:00,  1.56s/subject]
INFO | Checking the bidsmap run-items:
SUCCESS | All run-items in the bidsmap are valid
INFO | bids-
validator 1.14.6 test results (* = in .bidsignore):
INFO | False:	exclude/sub-DICOM_task-anatscoutMP
Rcor_acq-anatscout_echo-1_GR.*
SUCCESS | All generated bidsnames are BIDS-valid
INFO | Writing bidsm
ap to: /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/code/bidscoin/bidsmap.yaml
INFO | -------------- FINISHED! -------------------
INFO | 
SUCCESS | No BIDScoin errors or warnings
 were reported
INFO | 
INFO | For the complete log see: /home/jovyan/workspace/books/examples/workfl
ows/bidscoin_bids/code/bidscoin/bidsmapper.log
NB: That folder may contain privacy sensitive informa
tion, e.g. pathnames in logfiles and provenance data samples
INFO |
INFO | -------------- START BIDScoiner 4.3.3+qt5: BIDS 1.9.0 ------------
INFO | >>> bidscoiner sourcefolder=/home/jovyan/workspace/books/examples/workflows/heudiconv-reproin
-example/REPROIN/dicom bidsfolder=/home/jovyan/workspace/books/examples/workflows/bidscoin_bids part
icipant=None force=False bidsmap=bidsmap.yaml
INFO | Creating dataset description file: /home/jovyan
/workspace/books/examples/workflows/bidscoin_bids/dataset_description.json
INFO | Creating a templat
e README file (adjust it to your needs): /home/jovyan/workspace/books/examples/workflows/bidscoin_bi
ds/README
INFO | Reading: /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/code/bidscoin/bidsmap.
yaml
INFO | Checking the bidsmap run-items:
SUCCESS | All run-items in the bidsmap are valid
INFO
 | ------------------- Subject 1/1 -------------------
  0%|          | 0/1 [00:00<?, ?sub
ject/s]
INFO | >>> Coining datasources in: /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin
-example/REPROIN/dicom/001/Patterson_Coben - 1
  0%|          | 0/1 [00:00<?, ?subject/s]
VERBOSE | Executing plugin: dcm2niix2bids
  0%|          | 0/1 [00:00<?, ?subject/s]
INFO | --> Leaving out: /home/jovyan/workspace/books/exa
mples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/Localizers_4
  0%|          | 0/1 [00:00<?, ?subject/s]
INFO | --> Coining: /home/jovyan/workspace/books/example
s/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqMPRAGE_6
  0
%|          | 0/1 [00:00<?, ?subject/s]
VERBOSE | Command:
dcm2niix -b y -z y -i n -l n -f "sub-1_ses-1_acq-anatT1wacqMPRAGE_T1w" -o "/home
/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/anat" "/home/jovyan/workspace/b
ooks/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/anatT1w_acqM
PRAGE_6"
  0%|          | 0/1 [00:00<?, ?subject/s]
VERBOSE | Output:
Chris Rorden's dcm2niiX version v1.0.2
0240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC12.2.0 x86-64 (64-bit Linux)
Found 240 DICOM file(s)
Conve
rt 240 DICOM as /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/anat/sub-1
_ses-1_acq-anatT1wacqMPRAGE_T1w (224x224x240x1)
Conversion required 1.334782 seconds (1.254043 for c
ore code).

  0%|          | 0/1 [00:01<?, ?subject/s]
INFO | --> Coining: /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example/REPROI
N/dicom/001/Patterson_Coben - 1/dwi_dirAP_9
  0%|          | 0/1 [00:01<?, ?subject/s]
VERBOSE | Command:
dcm2niix -b y -z y -i n -l n -f "sub-1_ses-1_acq-dwidirAP_dir-AP_dwi" -o "/home/j
ovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/dwi" "/home/jovyan/workspace/book
s/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/dwi_dirAP_9"
  0%|          | 0/1 [00:01<?, ?subject/s]
VERBOSE | Output:
Chris Rorden's dcm2niiX version v1.0.20240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC12
.2.0 x86-64 (64-bit Linux)
Found 16 DICOM file(s)
Convert 16 DICOM as /home/jovyan/workspace/books/e
xamples/workflows/bidscoin_bids/sub-1/ses-1/dwi/sub-1_ses-1_acq-dwidirAP_dir-AP_dwi (122x122x66x16)
Conversion required 1.730533 seconds (1.681761 for core code).

  0%|          | 0/1 [00:03<?, ?subject/s]
INFO | --> Coining: /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example/REPROI
N/dicom/001/Patterson_Coben - 1/fmap_acq4mm_7
  0%|          | 0/1 [00:03<?, ?subject/s]
VERBOSE | Command:
dcm2niix -b y -z y -i n -l n -f "sub-1_ses-1_acq-fmapacq4mm_magnitude1" -o "/home
/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap" "/home/jovyan/workspace/b
ooks/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_
7"
  0%|          | 0/1 [00:03<?, ?subject/s]
VERBOSE | Output:
Chris Rorden's dcm2niiX version v1.0.2
0240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC12.2.0 x86-64 (64-bit Linux)
Found 88 DICOM file(s)
Slices
 not stacked: echo varies (TE 4.92, 7.38; echo 1, 2). Use 'merge 2D slices' option to force stacking

Convert 44 DICOM as /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/
sub-1_ses-1_acq-fmapacq4mm_magnitude1_e1 (64x64x44x1)
Convert 44 DICOM as /home/jovyan/workspace/boo
ks/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_magnitude1_e2 (64x64
x44x1)
Conversion required 0.054727 seconds (0.054639 for core code).

  0%|          | 0/
VERBOSE | Found dcm2niix ['e1'] p
ostfixes, renaming
/home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/su
b-1_ses-1_acq-fmapacq4mm_magnitude1_e1.nii.gz ->
/home/jovyan/workspace/books/examples/workflows/bid
scoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_magnitude1.nii.gz
  0%|          |
VERBOSE | Found dcm2niix ['e2']
 postfixes, renaming
/home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/
sub-1_ses-1_acq-fmapacq4mm_magnitude1_e2.nii.gz ->
/home/jovyan/workspace/books/examples/workflows/b
idscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_magnitude2.nii.gz
  0%|          
| 0/1 [00:03<?, ?subject/s]
INFO | --> Coining: /home/jovyan/workspace/books/example
s/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8
  0%|          | 0/1 [00:03<?, ?subject/s]
VERBOSE | Command:
dcm2niix -b y -z y -i n -l n -f "sub-
1_ses-1_acq-fmapacq4mm_phasediff" -o "/home/jovyan/workspace/books/examples/workflows/bidscoin_bids/
sub-1/ses-1/fmap" "/home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example/REPROIN
/dicom/001/Patterson_Coben - 1/fmap_acq4mm_8"
  0%|          | 0/1 [00:03<?, ?subject/s]
VERBOSE | Output:
Chris Rorden's dcm2niiX version v1.0.2
0240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC12.2.0 x86-64 (64-bit Linux)
Found 44 DICOM file(s)
Conver
t 44 DICOM as /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_s
es-1_acq-fmapacq4mm_phasediff_e2_ph (64x64x44x1)
Conversion required 0.042840 seconds (0.027673 for
core code).

  0%|          | 0/1 [00:03<?, ?subject/s]
VERBOSE | Found dcm2niix ['e2', 'ph'] postfixes, renaming
/home/jovyan/workspace/books/exam
ples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_phasediff_e2_ph.nii.gz ->
/
home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapac
q4mm_phasediff.nii.gz
  0%|          | 0/1 [00:03<?, ?subject/s]
INFO | --> Coining: /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example/REPROI
N/dicom/001/Patterson_Coben - 1/fmap_dirPA_15
  0%|          | 0/1 [00:03<?, ?subject/s]
VERBOSE | Command:
dcm2niix -b y -z y -i n -l n -f "sub-1_ses-1_acq-fmapdirPA_fieldmap" -o "/home/jo
vyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap" "/home/jovyan/workspace/book
s/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/fmap_dirPA_15"
  0%|          | 0/1 [00:03<?, ?subject/s]
VERBOSE | Output:
Chris Rorden's dcm2niiX version v1.0.20240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC12
.2.0 x86-64 (64-bit Linux)
Found 132 DICOM file(s)
Convert 132 DICOM as /home/jovyan/workspace/books
/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapdirPA_fieldmap (122x122x66x2)

Conversion required 0.247915 seconds (0.217331 for core code).
  0%|          | 0/1 [00:04<?, ?subject/s]
INFO | --> Coining: /home/jovyan/workspace/books/examples/workflows/heudiconv-reproin-example/REPROI
N/dicom/001/Patterson_Coben - 1/func_taskrest_16
  0%|          | 0/1 [00:04<?, ?subject/s]
VERBOSE | Command:
dcm2niix -b y -z y -i n -l n -f "sub-1_ses-1_task-functaskrest_dir-AP_bold" -o "/
home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/func" "/home/jovyan/workspa
ce/books/examples/workflows/heudiconv-reproin-example/REPROIN/dicom/001/Patterson_Coben - 1/func_tas
krest_16"
  0%|          | 0/1 [00:04<?, ?subject/s]
VERBOSE | Output:
Chris Rorden's dcm2niiX version v1.0.2
0240202  (JP2:OpenJPEG) (JP-LS:CharLS) GCC12.2.0 x86-64 (64-bit Linux)
Found 4 DICOM file(s)
Convert
 4 DICOM as /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/func/sub-1_ses
-1_task-functaskrest_dir-AP_bold (64x64x44x4)
Conversion required 0.072939 seconds (0.062894 for cor
e code).

  0%|          | 0/1 [00:04<?, ?subject/s]
VERBOSE | Writing acquisition time data to: /home/jovyan
/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/sub-1_ses-1_scans.tsv
  0%|
     | 0/1 [00:04<?, ?subject/s]
VERBOSE | Writing sub-1 subject data to: /home/jovyan/workspace/books/examples/workflows/bidscoin_bi
ds/participants.tsv
  0%|          | 0/1 [00:04<?, ?subject/s]
VERBOSE | Writing subject meta data to: /home/jovyan/workspace/books/examples/workflows/bidscoin_bid
s/participants.json
  0%|          | 0/1 [00:04<?, ?subject/s]
WARNING | Empty IntendedFor/B0FieldSource/B0FieldIdentifier fieldmap values in /home/jovyan/workspac
e/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_magnitude1.json
 (i.e. the fieldmap may not be used)
  0%|          | 0/1 [00:04<?, ?subject/s]
WARNING | Empty IntendedFor/B0FieldSource/B0FieldIdentifier fieldmap values in /home/jovyan/workspac
e/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_magnitude2.json
 (i.e. the fieldmap may not be used)
  0%|          | 0/1 [00:04<?, ?subject/s]
WARNING | Empty IntendedFor/B0FieldSource/B0FieldIdentifier fieldmap values in /home/jovyan/workspac
e/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_phasediff.json
(i.e. the fieldmap may not be used)
  0%|          | 0/1 [00:04<?, ?subject/s]
WARNING | Empty IntendedFor/B0FieldSource/B0FieldIdentifier fieldmap values in /home/jovyan/workspac
e/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapdirPA_fieldmap.json (i
.e. the fieldmap may not be used)
  0%|          | 0/1 [00:04<?, ?subject/s]
100%|██████████| 1/1 [00:04<00:00,  4.22s/subject]
INFO | -------------- FINISHED! ------------
INFO |
INFO | The following BIDScoin errors and warnings were reported:

>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
>>>>>>
2026-03-10 05:58:17 - WARNING | Empty IntendedFor/B0FieldSource/B0FieldIdentifier fieldmap va
lues in /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_a
cq-fmapacq4mm_magnitude1.json (i.e. the fieldmap may not be used)
2026-03-10 05:58:17 - WARNING | Em
pty IntendedFor/B0FieldSource/B0FieldIdentifier fieldmap values in /home/jovyan/workspace/books/exam
ples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapacq4mm_magnitude2.json (i.e. the f
ieldmap may not be used)
2026-03-10 05:58:17 - WARNING | Empty IntendedFor/B0FieldSource/B0FieldIden
tifier fieldmap values in /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/
fmap/sub-1_ses-1_acq-fmapacq4mm_phasediff.json (i.e. the fieldmap may not be used)
2026-03-10 05:58:
17 - WARNING | Empty IntendedFor/B0FieldSource/B0FieldIdentifier fieldmap values in /home/jovyan/wor
kspace/books/examples/workflows/bidscoin_bids/sub-1/ses-1/fmap/sub-1_ses-1_acq-fmapdirPA_fieldmap.js
on (i.e. the fieldmap may not be used)
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
INFO | For the complete log see: /home/jovyan/workspace/books/examples/workflows/bidscoin_bids/code/
bidscoin/bidscoiner.log
NB: That folder may contain privacy sensitive information, e.g. pathnames in
 logfiles and provenance data samples

!tree ./bidscoin_bids/

./bidscoin_bids/
├── README
├── code
│   └── bidscoin
│       ├── bidscoiner.errors
│       ├── bidscoiner.log
│       ├── bidscoiner.tsv
│       ├── bidsmap.yaml
│       ├── bidsmapper.errors
│       └── bidsmapper.log
├── dataset_description.json
├── participants.json
├── participants.tsv
└── sub-1
    └── ses-1
        ├── anat
        │   ├── sub-1_ses-1_acq-anatT1wacqMPRAGE_T1w.json
        │   └── sub-1_ses-1_acq-anatT1wacqMPRAGE_T1w.nii.gz
        ├── dwi
        │   ├── sub-1_ses-1_acq-dwidirAP_dir-AP_dwi.bval
        │   ├── sub-1_ses-1_acq-dwidirAP_dir-AP_dwi.bvec
        │   ├── sub-1_ses-1_acq-dwidirAP_dir-AP_dwi.json
        │   └── sub-1_ses-1_acq-dwidirAP_dir-AP_dwi.nii.gz
        ├── fmap
        │   ├── sub-1_ses-1_acq-fmapacq4mm_magnitude1.json
        │   ├── sub-1_ses-1_acq-fmapacq4mm_magnitude1.nii.gz
        │   ├── sub-1_ses-1_acq-fmapacq4mm_magnitude2.json
        │   ├── sub-1_ses-1_acq-fmapacq4mm_magnitude2.nii.gz
        │   ├── sub-1_ses-1_acq-fmapacq4mm_phasediff.json
        │   ├── sub-1_ses-1_acq-fmapacq4mm_phasediff.nii.gz
        │   ├── sub-1_ses-1_acq-fmapdirPA_fieldmap.bval
        │   ├── sub-1_ses-1_acq-fmapdirPA_fieldmap.bvec
        │   ├── sub-1_ses-1_acq-fmapdirPA_fieldmap.json
        │   └── sub-1_ses-1_acq-fmapdirPA_fieldmap.nii.gz
        ├── func
        │   ├── sub-1_ses-1_task-functaskrest_dir-AP_bold.json
        │   └── sub-1_ses-1_task-functaskrest_dir-AP_bold.nii.gz
        └── sub-1_ses-1_scans.tsv

9 directories, 29 files

Dependencies in Jupyter/Python

• Using the package watermark to document system environment and software versions used in this notebook

%load_ext watermark

%watermark
%watermark --iversions

Last updated: 2026-03-10T05:58:18.627163+00:00

Python implementation: CPython
Python version       : 3.13.11
IPython version      : 9.9.0

Compiler    : GCC 14.3.0
OS          : Linux
Release     : 5.15.0-170-generic
Machine     : x86_64
Processor   : x86_64
CPU cores   : 32
Architecture: 64bit